NeuroTract 2.0
Interactive Diffusion-MRI Analysis Laboratory & Tractography Observatory
Reconstruct white matter streamlines, compute structural connectomes, stream real-time execution, and verify computations against authoritative DIPY and NetworkX baselines.
Viewing Mode
Choose how information is presented across the application
Active Subject: SUB1
Dataset Boundary & Scientific Ingestion Validator
Validates 4D volume dimensions, b-values, unit b-vectors, and SHA-256 hashes
Real-Time Pipeline Execution Engine
10-stage scientific processing with live telemetry and reproducible provenance
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Processing Pipeline
Features
3D Brain Visualization
Interactive brain surface with white matter tractography rendered in real-time using WebGL
Graph Network Analysis
Comprehensive connectome metrics including clustering, path length, efficiency, and modularity
Community Detection
Automated identification of functional brain modules using Louvain and Leiden algorithms
DTI Scalar Maps
Fractional anisotropy, mean diffusivity, axial and radial diffusivity maps
Anatomical Labels
89-region Desikan-Killiany parcellation with full anatomical names and descriptions
Multi-User Modes
Tailored views for clinicians, researchers, and students with adaptive interpretations
Upload New Data
Upload one 4D diffusion MRI volume with its matching b-values and b-vectors. The dataset is validated before it can enter the pipeline.
Pipeline inputs: NIfTI (.nii, .nii.gz), BVAL, and BVEC
NeuroTract 2.0.0 Scientific Laboratory (DIPY 1.11.0, NetworkX 3.6.1)